Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2021
Sammendrag
Large population increases of Arctic-breeding waterfowls over recent decades have intensified the conflict with agricultural interests in both Eurasia and North America. In the spring-staging region Vesterålen in sub-Arctic Norway, sheep, dairy and meat farmers have reported reduced agricultural grassland yields due to pink-footed geese Anser brachyrhynchus and barnacle geese Branta leucopsis that rest and forage in the region for 3–4 weeks in spring on their way to their breeding grounds on Svalbard. Here, we report from an experimental exclosure design where goose access to plots at three grassland fields in Vesterålen was prevented. The experiment was conducted over 3 years between 2012 and 2014. Goose abundance varied greatly between fields and years as a function of variable spring weather and forage quantity, facilitating evaluation of longer-term impacts under contrasting grazing intensities. First and second harvest yields across fields and years were 20% and 19% higher in exclosures than in plots open for grazing, while total yields (sum of first and second harvests) were on average 27% higher. Within-year effects on harvest yields varied substantially, primarily due to highly contrasting sward development during the spring-staging periods. Cool weather (2012) led to slow sward development and little or no effects on harvest yields, warmer weather (2013) resulted in generally large effects, while variable weather (2014) led to treatment effects varying across fields, with one field experiencing 61% higher yields in exclosures while there were no significant impacts on first-harvest yields at the two other fields. Goose grazing did not increase dry weight-based proportions of weeds. Overall, the farmers' reports on yield-loss due to goose grazing were confirmed, although impacts varied substantially between years. A novel finding is that second-harvest yields were also reduced. For the most affected farmers, it is unlikely that the current subsidy scheme is sufficient to cover all the their losses.
Forfattere
Ziyan Xu Yongjie Kuang Bin Ren Daqi Yan Fang Yan Carl Jonas Jorge Spetz Wenxian Sun Guirong Wang Xueping Zhou Huanbin ZhouSammendrag
Background Plant genome engineering mediated by various CRISPR-based tools requires specific protospacer adjacent motifs (PAMs), such as the well-performed NGG, NG, and NNG, to initiate target recognition, which notably restricts the editable range of the plant genome. Results In this study, we thoroughly investigate the nuclease activity and the PAM preference of two structurally engineered SpCas9 variants, SpG and SpRY, in transgenic rice. Our study shows that SpG nuclease favors NGD PAMs, albeit less efficiently than the previously described SpCas9-NG, and that SpRY nuclease achieves efficient editing across a wide range of genomic loci, exhibiting a preference of NGD as well as NAN PAMs. Furthermore, SpRY-fused cytidine deaminase hAID*Δ and adenosine deaminase TadA8e are generated, respectively. These constructs efficiently induce C-to-T and A-to-G conversions in the target genes toward various non-canonical PAMs, including non-G PAMs. Remarkably, high-frequency self-editing events (indels and DNA fragments deletion) in the integrated T-DNA fragments as a result of the nuclease activity of SpRY are observed, whereas the self-editing of SpRY nickase-mediated base editor is quite low in transgenic rice lines. Conclusions The broad PAM compatibility of SpRY greatly expands the targeting scope of CRISPR-based tools in plant genome engineering.
Forfattere
Trygve S. Aamlid Jon Sæland Arne Svalastog Simen Settendal Kristine Sundsdal Trond Olav PettersenSammendrag
Det er ikke registrert sammendrag
Forfattere
Arne StensvandSammendrag
Det er ikke registrert sammendrag
Forfattere
Marius HauglinSammendrag
Det er ikke registrert sammendrag
Forfattere
Teresa Barreneche Maria Cárcamo de la Concepción Marine Blouin-Delmas Matthew Ordidge Hilde Nybom Gunars Lacis Daina Feldmane Jiri Sedlak Mekjell Meland Hedi Kaldmae Kersti Kahu Zsuzsanna Bekefi Sanda Stanivukovic Gordana Đurić Monika Høfer Martin Galik Elisabeth Schüller Andreas Spornberger Sorina Sirbu Pavlina Drogoudi Ana Christina Agulheiro-Santos Ossama Kodad Ales Vokurka Marc Lateur Felicidad Fernandez Fernandez Daniela Giovannini José Quero-GarcíaSammendrag
Sweet cherry (Prunus avium L.) is a temperate fruit species whose production might be highly impacted by climate change in the near future. Diversity of plant material could be an option to mitigate these climate risks by enabling producers to have new cultivars well adapted to new environmental conditions. In this study, subsets of sweet cherry collections of 19 European countries were genotyped using 14 SSR. The objectives of this study were (i) to assess genetic diversity parameters, (ii) to estimate the levels of population structure, and (iii) to identify germplasm redundancies. A total of 314 accessions, including landraces, early selections, and modern cultivars, were monitored, and 220 unique SSR genotypes were identified. All 14 loci were confirmed to be polymorphic, and a total of 137 alleles were detected with a mean of 9.8 alleles per locus. The average number of alleles (N = 9.8), PIC value (0.658), observed heterozygosity (Ho = 0.71), and expected heterozygosity (He = 0.70) were higher in this study compared to values reported so far. Four ancestral populations were detected using STRUCTURE software and confirmed by Principal Coordinate Analysis (PCoA), and two of them (K1 and K4) could be attributed to the geographical origin of the accessions. A N-J tree grouped the 220 sweet cherry accessions within three main clusters and six subgroups. Accessions belonging to the four STRUCTURE populations roughly clustered together. Clustering confirmed known genealogical data for several accessions. The large genetic diversity of the collection was demonstrated, in particular within the landrace pool, justifying the efforts made over decades for their conservation. New sources of diversity will allow producers to face challenges, such as climate change and the need to develop more sustainable production systems.
Forfattere
Henrik Forsberg MathiesenSammendrag
Det er ikke registrert sammendrag
Forfattere
Giorgia Carnovale Filipa Rosa Volha Shapaval Simona Dzurendova Achim Kohler Trude Wicklund Svein Jarle Horn Maria J. Barbosa Kari SkjånesSammendrag
The use of microalgal starch has been studied in biorefinery frameworks to produce bioethanol or bioplastics, however, these products are currently not economically viable. Using starch-rich biomass as an ingredient in food applications is a novel way to create more value while expanding the product portfolio of the microalgal industry. Optimization of starch production in the food-approved species Chlorella vulgaris was the main objective of this study. High-throughput screening of biomass composition in response to multiple stressors was performed with FTIR spectroscopy. Nitrogen starvation was identified as an important factor for starch accumulation. Moreover, further studies were performed to assess the role of light distribution, investigating the role of photon supply rates in flat panel photobioreactors. Starch-rich biomass with up to 30% starch was achieved in cultures with low inoculation density (0.1 g L−1) and high irradiation (1800 µmol m−2 s−1). A final large-scale experiment was performed in 25 L tubular reactors, achieving a maximum of 44% starch in the biomass after 12 h in nitrogen starved conditions.
Forfattere
Giorgia Carnovale Filipa Rosa Volha Shapaval Simona Dzurendova Achim Kohler Trude Wicklund Svein Jarle Horn Maria Barbosa Kari SkjånesSammendrag
ABSTRACT The use of microalgal starch has been studied in biorefinery frameworks to produce bioethanol or bioplastics, however, these products are currently not economically viable. Using starch−rich biomass as an ingredient in food applications is a novel way to create more value while expanding the product portfolio of the microalgal industry. Optimization of starch production in the food−approved species Chlorella vulgaris was the main objective of this study. High−throughput screening of biomass composition in response to multiple stressors was performed with FTIR spectroscopy and nitrogen starvation was identified as an important factor for starch accumulation. Further studies were subsequently performed to assess the role of light distribution, investigating photon supply rates in flat panel photobioreactors. Biomass specific photon supply rate proved to have a strong effect on the accumulation of storage compounds and starch−rich biomass with up to 30% starch was achieved in cultures with low inoculation density (0.1 g L−1) and high irradiation (1800 μmol m−2 s−1). A final large scale experiment was performed in 25 L tubular reactors, achieving a maximum of 44% starch in the biomass after 12 hours in nitrogen starved conditions. Keywords: Chlorella vulgaris, starch, FTIR, photon supply rate, microalgae
Forfattere
Michal Sposob Radziah Wahid Svein Jarle HornSammendrag
Det er ikke registrert sammendrag