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Publications

NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.

2010

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Abstract

Conclusions: CYP75A31 (NCBI accession number GQ904194), encodes a flavonoid 3'5'-hydroxylase, which accepts flavones, flavanones, dihydroflavonols and flavonols as substrates. The expression of the CYP75A31 gene was found to increase in response to nitrogen deprivation, in accordance with other genes in the phenylpropanoid pathway, as expected for a gene involved in flavonoid metabolism.

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Abstract

Information retrieval from spatiotemporal data cubes is key to earth system sciences. Respective analyses need to consider two fundamental issues: First, natural phenomena fluctuate on different time scales. Second, these characteristic temporal patterns induce multiple geographical gradients. Here we propose an integrated approach of subsignal extraction and dimensionality reduction to extract geographical gradients on multiple time scales. The approach is exemplified using global remote sensing estimates of photosynthetic activity. A wide range of partly well interpretable gradients is retrieved. For instance, well known climate-induced anomalies in FAPAR over Africa and South America during the last severe ENSO event are identified. Also, the precise geographical patterns of the annual–seasonal cycle and its phasing are isolated. Other features lead to new questions on the underlying environmental dynamics. Our method can provide benchmarks for comparisons of data cubes, model runs, and thus be used as a basis for sophisticated model performance evaluations.

Abstract

Drawing upon the resource-based view (RBV) of the firm and Porter’s five forces, this study examines CEOs’ perceptions of the drivers of competitive advantage in Finnish and Norwegian small- and medium-sized (SME) sawmills. Using qualitative data from CEO interviews and secondary data sources, the results show differences in relevant resources among SME sawmills. In some cases, high-quality raw material is a driver of above-average industry performance, while certain organizational resources, together with correct positioning within an industry, are a way to compensate for a lack of other sources of competitive advantage. Resources such as advanced production technology or a flat organizational structure are essential to diluting the weaknesses of the case companies. Our cases also clarify the important role of intangible resources (e.g., personnel being willing to change).

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Abstract

This review describes the effects of the current and emerging lighting technologies on plants, and the plant-mediated effects on herbivorous and beneficial arthropods in high-technology year-round greenhouse production, where light quality, quantity and photoperiod differ from the natural environment. The spectrum provided by the current lighting technology, high-pressure sodium lamp (HPSL), differs considerably from that of solar radiation. The major plantmediated effects on arthropods were predicted to result from (a) extended photoperiods and lower light integrals, (b) the attenuation of ultraviolet (UV) wavelengths, particularly UV-B, (c) the high red: far-red (R : FR) ratio and lower blue : red (B : R) in comparison with solar radiation and (d) the high proportion of yellowwavelengths during winter months. Of these light factors (a-d) (ceteris paribus), (a) and (b) were hypothesised to result in increased performance of herbivores in winter months, whereas the high R : FR ratio decreased herbivore performance or not affected it, at least when interlights are used. The predictions obtained on the basis of this review are also discussed in relation to the modifying factors prevailing in these production environments: enriched CO2 levels, high nutrient amounts, optimised irrigation and temperatures optimal for plants" needs. Based on the carbon/nitrogen and growth/differentiation balance theories, these modifying factors tend to produce plants that allocate most resources to growth at the expense of defensive secondary metabolism and physicochemical defensive structures. At the end, this review discusses knowledge gaps and future research prospects, in which light-emitting diodes, the emerging lighting technology, play an important role by enabling the targeted manipulation of plant responses to different wavelengths.

Abstract

The gas chromatography mass spectrometry (GC-MS) deconvolution reporting software (DRS) from Agilent Technologies has been evaluated for its ability as a screening tool to detect a large number ofpesticides in incurred and fortified samples extracted with acetone/dichloromethane/light petroleum(Mini-Luke method). The detection of pesticides is based on fixed retention times using retention timelocking (RTL) and full scan mass spectral comparison with a partly customer built automated massspectral deconvolution and identification system (AMDIS) database. The GC-MS was equipped with a programmable temperature vaporising (PTV) injector system which enables more sample to be injected.In a blind study of 52 real samples a total number of 158 incurred pesticides were found. In addition to the 85 pesticides found by manual interpretation of GC-NPD/ECD chromatograms, the DRS revealed 73 morepesticides (+46%). The DRS system also shows its potential to discover pesticides which are normally notsearched for (EPN in long beans from Thailand). A spiking experiment was performed to blank matricesof apple, orange and lettuce with 177 different pesticides at concentration levels 0.02 and 0.1 mg/kg. The samples were analysed on GC-MS full scan and the AMDIS match factor was used as a mass spectralquality criterion. The threshold level of the AMDIS match factor was set at 20 to eliminate most of thefalse positives. AMDIS match factors from 20 up to 69 are regarded only as indication of a positive hit andmust be followed by manual interpretation. Pesticides giving AMDIS match factors at ≥70 are regarded as identified. To simplify and decrease the large amount of data generated at each concentration level,the AMDIS match factors ≥20 was averaged (mean AMF) for each pesticide including the commodities and their replicates. Among 177 different pesticides spiked at 0.02 and 0.1 mg/kg level, the percentage of mean AMF values ≥70 were 23% and 80%, respectively. For 531 individual detections of pesticides (177pesticides×3 replicates) giving AMDIS match factor 20 in apple, orange and lettuce, the detection rates at 0.02 mg/kg were 71%, 63% and 72%, respectively. For the 0.1 mg/kg level the detection rates were 89%,85% and 89%, respectively. In real samples some manual interpretation must be performed in addition. However, screening by GC-MS/DRS is about 5-10 times faster compared to screening with GC-NPD/ECDbecause the time used for manual interpretation is much shorter and there is no need for re-injection on GC-MS for the identification of suspect peaks found on GC-NPD/ECD.