Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2024
Authors
Saskia Wutke Stephan M. Blank Jean-Luc Boevé Brant C. Faircloth Frank Koch Catherine R. Linnen Tobias Malm Gengyun Niu Marko Prous Nathan M. Schiff Stefan Schmidt Andreas Taeger Lars Vilhelmsen Niklas Wahlberg Meicai Wei Tommi NymanAbstract
Phylogenomic approaches have recently helped elucidate various insect relationships, but large-scale comprehensive analyses on relationships within sawflies and woodwasps are still lacking. Here, we infer the relationships and long-term biogeographic history of these hymenopteran groups using a large dataset of 354 UCE loci collected from 385 species that represent all major lineages. Early Hymenoptera started diversifying during the Early Triassic ∼249 Ma and spread all over the ancient supercontinent Pangaea. We recovered Xyeloidea as a monophyletic sister group to other Hymenoptera and Pamphilioidea as sister to Unicalcarida. Within the diverse family Tenthredinidae, our taxonomically and geographically expanded taxon sampling highlights the non-monophyly of several traditionally defined subfamilies. In addition, the recent removal of Athalia and related genera from the Tenthredinidae into the separate family Athaliidae is supported. The deep historical biogeography of the group is characterised by independent dispersals and re-colonisations between the northern (Laurasia) and southern (Gondwana) palaeocontinents. The breakup of these landmasses led to ancient vicariance in several Gondwanan lineages, while interchange across the Northern Hemisphere has continued until the Recent. The little-studied African sawfly fauna is likewise a diverse mixture of groups with varying routes of colonization. Our results reveal interesting parallels in the evolution and biogeography of early hymenopterans and other ancient insect groups.
Authors
Valentina Sierra-Jimenez Jonathan P. Mathews Pilsun Yoo Alice Budai Farid Chejne Anthony Dufour Manuel Garcia-PerezAbstract
A well-defined methodology for constructing appropriate atomistic representations of biochar will aid in visualizing the structural features and elucidating biochar behavior with molecular dynamics (MD) simulations. Such knowledge will facilitate engineering biochars tailored to specific applications. To achieve this goal, we adapted modeling strategies applied in coal science by employing multi-cross-polarization 13C nuclear magnetic resonance, ultimate analysis, Fourier-transform infrared spectroscopy, and X-ray photoelectron spectroscopy to identify functional groups. Helium density, surface area, and porosity were used to assess structural features. Biochar's aromatic cluster size distribution was proposed based on data from the benzene polycarboxylic acid method. The computational framework reduces bias by incorporating chemical information derived from density functional theory, reactive MD simulations, and advanced characterization data. The construction approach was successfully applied to cellulose biochars produced at four temperatures, obtaining independent representations with a relative error on the atomic contents of <10 % for oxygen and nitrogen and <5 % for carbon and hydrogen. The atomistic representations were validated using X-ray diffraction, electron spin resonance data, and laser desorption/ionization Fourier-transform ion cyclotron resonance-mass spectrometry. The code will assist others in overcoming structural creation barriers and enable the utilization of the generated structures for further simulations.
Authors
Mingkai Jiang Belinda E. Medlyn David Wårlind Jürgen Knauer Katrin Fleischer Daniel S. Goll Stefan Olin Xiaojuan Yang Lin Yu Sönke Zaehle Haicheng Zhang He Lv Kristine Y. Crous Yolima Carrillo Catriona Macdonald Ian Anderson Matthias M. Boer Mark Farrell Andrew Gherlenda Laura Castañeda-Gómez Shun Hasegawa Klaus Jarosch Paul Milham Raúl Ochoa-Hueso Varsha Pathare Johanna Pihlblad Juan Piñeiro Nevado Jeff Powell Sally A. Power Peter Reich Markus Riegler David S. Ellsworth Benjamin SmithAbstract
No abstract has been registered
Authors
Jorunn Børve Katharina Pampus Tuuli Haikonen Andrea Podavkova Gaute Myren Roland W. S. WeberAbstract
No abstract has been registered
Authors
Jiunn Luh Tan Nina Trandem Zhibo Hamborg Bijaya Sapkota Dag-Ragnar Blystad Jana Fránová Rostislav ZemekAbstract
No abstract has been registered
Authors
Linn Vassvik Vigdis Vandvik Silje Andrea Hjortland Östman Anders Nielsen Aud Helen HalbritterAbstract
No abstract has been registered
Authors
Emil Sandström Tove Ortman Christine A Watson Jan Bengtsson Clara Gustafsson Göran BergkvistAbstract
One of the major challenges facing agricultural and food systems today is the loss of agrobiodiversity. Considering the current impasse of preventing the worldwide loss of crop diversity, this paper highlights the possibility for a radical reorientation of current legal seed frameworks that could provide more space for alternative seed systems to evolve which centre on norms that support on-farm agrobiodiversity. Understanding the underlying norms that shape seed commons are important, since norms both delimit and contribute to what ultimately will constitute the seeds and who will ultimately have access to the seeds and thus to the extent to which agrobiodiversity is upheld and supported. This paper applies a commoning approach to explore the underpinning norms of a Swedish seed commons initiative and discusses the potential for furthering agrobiodiversity in the context of wider legal and authoritative discourses on seed enclosure. The paper shows how the seed commoning system is shaped and protected by a particular set of farming norms, which allows for sharing seeds among those who adhere to the norms but excludes those who will not. The paper further illustrates how farmers have been able to navigate fragile legal and economic pathways to collectively organize around landrace seeds, which function as an epistemic farming community, that maintain landraces from the past and shape new landraces for the present, adapted to diverse agro-ecological environments for low-input agriculture. The paper reveals how the ascribed norms to the seed commons in combination with the current seed laws set a certain limit to the extent to which agrobiodiversity is upheld and supported and discusses why prescriptions of “getting institutions right” for seed governance are difficult at best, when considering the shifting socio-nature of seeds. To further increase agrobiodiversity, the paper suggests future seed laws are redirected to the sustenance of a proliferation of protected seed commoning systems that can supply locally adapted plant material for diverse groups of farmers and farming systems.
Authors
Elena L. Zvereva Benjamin Adroit Tommi Andersson Craig R. A. Barnett Sofia Branco Bastien Castagneyrol Giancarlo Maria Chiarenza Wesley Dáttilo Ek del-Val Jan Filip Jory Griffith Anna L. Hargreaves Juan Antonio Hernández-Agüero Isabelle L. H. Silva Yixuan Hong Gabriella Kietzka Petr Klimeš Max Koistinen Oksana Y. Kruglova Satu Kumpula Paula Lopezosa Marti March-Salas Robert J. Marquis Yuri M. Marusik Angela T. Moles Anne Muola Mercy Murkwe Akihiro Nakamura Cameron Olson Emilio Pagani-Núñez Anna Popova Olivia Rahn Alexey Reshchikov Antonio Rodriguez-Campbell Seppo Rytkönen Katerina Sam Antigoni Sounapoglou Robert Tropek Cheng Wenda Guorui Xu Yu Zeng Maxim Zolotarev Natalia A. Zubrii Vitali Zverev Mikhail V. KozlovAbstract
No abstract has been registered
Abstract
1. Persistence of standing dead trees (snags) is an important determinant for their role for biodiversity and dead wood associated carbon fluxes. How fast snags fall varies widely among species and regions and is further influenced by a variety of stand- and tree-level factors. However, our understanding of this variation is fragmentary at best, partly due to lack of empirical data. 2. Here, we took advantage of the accruing time series of snag observations in the Finnish, Norwegian and Swedish National Forest Inventories that have been followed in these programs since the mid-1990s. We first harmonized observations from slightly different inventory protocols and then, using this harmonized dataset of ca. 43,000 observations that had a consistent 5-year census interval, we modelled the probability of snags of the main boreal tree species Pinus sylvestris, Picea abies and Betula spp. falling, as a function of tree- and stand-level variables, using Bayesian logistic regression modelling. 3. The models were moderately good at predicting snags remaining standing or falling, with a correct classification rate ranging from 68% to 75% among species. 4. In general, snag persistence increased with tree size and climatic wetness, and decreased with temperature sum, advancing stage of decay, site productivity and disturbance intensity (mainly harvesting). 5. Synthesis and applications: The effect of harvesting demonstrates that an efficient avenue to increase the amount of snags in managed forests is protecting them during silvicultural operations. In the warmer future, negative relationship between snag persistence and temperature suggests decreasing the time snags remain standing and hence decreasing habitat availability for associated species. As decomposition rates generally increase after fall, decreasing snag persistence also implies substantially faster release of carbon from dead wood.
Abstract
No abstract has been registered