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Publications

NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.

2024

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Abstract

Within the EU Horizon project OPTAIN (OPtimal strategies to reTAIN and re-use water and nutrients in small agricultural catchments across different soil-climatic regions in Europe, optain.eu) project, the effects of Natural/Small Water Retention Measures (NSWRMs) on water regime, soil erosion and nutrient transport are evaluated at both, catchment- and field-scales for present and future climate conditions. Our goal is to perform an integrated, model-based assessment of the effectiveness of NSWRMs at field scale and cross-validated these results from those obtained from the catchment-scale modelling. The field-scale assessment is based on the adaptation of the SWAP mathematical model to seven pilot sites across three European biogeographical regions and on combined NSWRM – projected climate scenario analyses. The scenarios are designed to evaluate the efficiency and potential of different natural/small water retention measures in improving soil water retention and reducing flash floods and the loss of soil and nutrients under changing climate conditions. We present the harmonized SWAP modelling workflow and the combined scenario analyses, including the implementation of various in-field measures in the SWAP model. Examples of model calibration, validation and scenario results for selected pilot sites will be given.

Abstract

“rswap” is an R package under development for SWAP 4.2 with the goal of simplifying, automating, and improving user interaction with the model. The package functions by detecting and translating SWAP input files into R-compatible dataframes, allowing for easy and automated modifications to parameters. Modified model inputs can then be re-written to files and run in SWAP from the R console using "rswap". SWAP model output can be automatically imported into the R environment and visualized using a variety of (interactive) graphing functions. If observational data is provided by the user, then the package can adjust output settings to match (variables and depth). Modelled and observed data can then be graphically compared in-line and “goodness-of-fit” statistics can be generated and plotted. Additionally, model runs can be saved and interactively compared with each other, functions are thoroughly documented with runnable examples, and a baseline runnable model setup can be automatically initialized. Further planned developments to the package include support for parallel running of model runs, enabling rapid automated sensitivity analysis, scenario analysis, as well as automated “hard calibration” routines and parameter estimation. Through this functionality, “rswap” can connect the SWAP model to an integrated development environment (IDE), such as “RStudio”, allowing users to efficiently perform all their work (setup, calibration, execution, analysis) in a single environment. Importantly, the packages allows for direct use of SWAP with the vast array of research software on the R platform. “rswap” is an open-source project originally developed for use in OPTAIN (optain.eu) and has been applied in multiple case studies and thesis projects.

Abstract

Microbial source tracking (MST) has been recognised as an effective tool for determining the origins and sources of faecal contamination in various terrestrial and aquatic ecosystems. Thus, it has been widely applied in environmental DNA (eDNA) surveys to define specific animal- and human-associated faecal eDNA. In this context, identification of and differentiation between anthropogenic and zoogenic faecal pollution origins and sources are pivotal for the evaluation of waterborne microbial contamination transport and the associated human, animal, and environmental health risks. These concerns are particularly pertinent to diverse nature-based solutions (NBS) that are being applied specifically to secure water safety and human and ecosystem well-being, for example, constructed wetlands (CWs) for water and wastewater treatment. The research in this area has undergone a constant evolution, and there is a solid foundation of publications available across the world. Hence, there is an early opportunity to synthesise valuable information and relevant knowledge on this specific topic, which will greatly benefit future work by improving NBS design and performance. By selecting 15 representative research reports published over 20 years, we review the current state of MST technology applied for faecal-associated contamination measures in NBS/CWs throughout the world.

Abstract

This report presents the results of monitoring undertaken by OSPAR Contracting Parties for the Riverine Inputs and Direct Discharges Programme (RID) during 2022. The purpose of the RID Programme is to assess, as accurately as possible, all riverine inputs and direct discharges of selected pollutants to Convention waters on an annual basis, and to contribute to the implementation of the Joint Assessment and Monitoring Programme (JAMP). The OSPAR Convention area is divided into five main regions: the Arctic Waters, the Greater North Sea, the Celtic Seas, the Bay of Biscay, and the Wider Atlantic. Determinands monitored on a mandatory basis include nutrients, heavy metals (mercury, cadmium, copper, zinc, and lead), suspended particulate matter, and salinity (in saline waters). Several more determinands can be monitored on a voluntary basis. Direct discharge sources can include sewage treatment plants, industry, and aquaculture; some Contracting Parties also report urban runoff. Not all Contracting Parties report their direct discharges. Since the programme started in 1990, many Contracting Parties report an overall reduction in flow normalized riverine loads of nutrients and metals, although there are large variations from year to year. Direct discharges of nutrients and metals are also declining in many areas, with some exceptions. For 2022, increase in direct discharges was reported in some areas, but these have no effect on the general trends, since the reported direct discharges are smaller than the riverine inputs in almost all the cases. Only direct discharges from unmonitored areas, including areas downstream of sampling points and discharges directly to the sea are included. The direct discharges upstream of the sampling points are included in the riverine inputs. The report also gives an overview of the different efforts carried out by both CPs and the RID Data Centre to improve the data quality of the programme. Despite these efforts, the long-term data series still have some gaps and inconsistencies, which is unfortunate. Hence, the Report also gives recommendations on how to handle incomplete or missing datasets. The CPs are asked to scrutinize the historical RID data series, and correct them whenever needed, to improve the data quality in the RID database.

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Abstract

The new scientific decade (2023-2032) of the International Association of Hydrological Sciences (IAHS) aims at searching for sustainable solutions to undesired water conditions – whether it be too little, too much or too polluted. Many of the current issues originate from global change, while solutions to problems must embrace local understanding and context. The decade will explore the current water crises by searching for actionable knowledge within three themes: global and local interactions, sustainable solutions and innovative cross-cutting methods. We capitalise on previous IAHS Scientific Decades shaping a trilogy; from Hydrological Predictions (PUB) to Change and Interdisciplinarity (Panta Rhei) to Solutions (HELPING). The vision is to solve fundamental water-related environmental and societal problems by engaging with other disciplines and local stakeholders. The decade endorses mutual learning and co-creation to progress towards UN sustainable development goals. Hence, HELPING is a vehicle for putting science in action, driven by scientists working on local hydrology in coordination with local, regional, and global processes.