Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2018
Forfattere
E. Stefanczyk M. Brylinska May Bente Brurberg Ragnhild Nærstad Abdelhameed Elameen S. Sobkowiak J. SliwkaSammendrag
The oomycete Phytophthora infestans, the cause of late blight, is one of the most important potato pathogens. During infection, it secretes effector proteins that manipulate host cell function, thus contributing to pathogenicity. This study examines sequence differentiation of two P. infestans effectors from 91 isolates collected in Poland and Norway and five reference isolates. A gene encoding the Avr-vnt1 effector, recognized by the potato Rpi-phu1 resistance gene product, is conserved. In contrast, the second effector, AvrSmira1 recognized by Rpi-Smira1, is highly diverse. Both effectors contain positively selected amino acids. A majority of the polymorphisms and all selected sites are located in the effector C-terminal region, which is responsible for their function inside host cells. Hence it is concluded that they are associated with a response to diversified target protein or recognition avoidance. Diversification of the AvrSmira1 effector sequences, which existed prior to the large-scale cultivation of plants containing the Rpi-Smira1 gene, may reduce the predicted durability of resistance provided by this gene. Although no isolates virulent to plants with the Rpi-phu1 gene were found, the corresponding Avr-vnt1 effector has undergone selection, providing evidence for an ongoing ‘arms race’ between the host and pathogen. Both genes remain valuable components for resistance gene pyramiding.
Forfattere
Zhibo HamborgSammendrag
No abstract has been registered
Sammendrag
In spite of its important role as predator of small game species, estimating the density of red fox Vulpes vulpes has been hampered by the species’ highly variable ranging pattern and elusive behavior. DNA analysis from scats combined with spatially explicit capture–recapture (SECR) modeling might remedy this. In a 50-km2 coniferous forest in southeast Norway, we collected scats on logging roads in late winter. DNA was extracted, amplified, and genotyped using 11 microsatellite markers. Of 184 samples collected, 126 were genotyped successfully, of which 46 (36.5%) produced individual genetic profiles. Twenty-five of these were different individuals: 13 females and 12 males. Nine of them were identified in multiple scats; mean recapture rate among all was 1.8/animal. Applying a conventional capture–recapture model (CAPWIRE) to the genotyped samples, 36 (95% CI 26–52) different individuals were estimated to have been present in the area during the sampling period. For estimating population density, we constructed three differently sized occupancy areas based on distances between recaptures, viz. ½ and 1/1 mean maximum distance moved (MMDM) and the local convex hull home range method (LoCoH). Areas varied from 60 km2 (½MMDM) to 112 km2 (MMDM), producing density estimates of 0.60 and 0.32 foxes/km2, respectively; the 95% LoCoH range method produced an estimate of 0.44 animals/km2 . Based on SECR modeling, the density was estimated at 0.38 (95% CI 0.21–0.70) animals/km2 . Smaller confidence intervals are expected with more appropriate sampling design than used in this pilot study.
Forfattere
Melissa MagerøySammendrag
No abstract has been registered
Forfattere
Melissa Magerøy Hugh B. Cross Torstein Tengs Carl Gunnar Fossdal Pierre Petriacq Adam Vivian-Smith Tao Zhao Paal KrokeneSammendrag
No abstract has been registered
Forfattere
Gunnhild SøgaardSammendrag
No abstract has been registered
Sammendrag
No abstract has been registered
Forfattere
Sebastian Sippel Markus Reichstein Xuanlong Ma Miguel D. Mahecha Holger Lange Milan Flach Dorothea FrankSammendrag
Purpose of the Review Weather and climate extremes substantially affect global- and regional-scale carbon (C) cycling, and thus spatially or temporally extended climatic extreme events jeopardize terrestrial ecosystem carbon sequestration. We illustrate the relevance of drought and/or heat events (“DHE”) for the carbon cycle and highlight underlying concepts and complex impact mechanisms. We review recent results, discuss current research needs and emerging research topics. Recent Findings Our review covers topics critical to understanding, attributing and predicting the effects of DHE on the terrestrial carbon cycle: (1) ecophysiological impact mechanisms and mediating factors, (2) the role of timing, duration and dynamical effects through which DHE impacts on regional-scale carbon cycling are either attenuated or enhanced, and (3) large-scale atmospheric conditions under which DHE are likely to unfold and to affect the terrestrial carbon cycle. Recent research thus shows the need to view these events in a broader spatial and temporal perspective that extends assessments beyond local and concurrent C cycle impacts of DHE. Summary Novel data streams, model (ensemble) simulations, and analyses allow to better understand carbon cycle impacts not only in response to their proximate drivers (drought, heat, etc.) but also attributing them to underlying changes in drivers and large-scale atmospheric conditions. These attribution-type analyses increasingly address and disentangle various sequences or dynamical interactions of events and their impacts, including compensating or amplifying effects on terrestrial carbon cycling.
Sammendrag
No abstract has been registered
Sammendrag
No abstract has been registered