Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2021
Authors
Juliana D. Klein Tamaryn A. Asbury Charlene da Silva Kelvin L. Hull Matthew L. Dicken Enrico Gennari Simo Maduna Aletta E Bester-van der MerweAbstract
The common smooth-hound shark, Mustelus mustelus, is a widely distributed demersal shark under heavy exploitation from various fisheries throughout its distribution range. To assist in the development of appropriate management strategies, the authors evaluate stock structure, site fidelity and movement patterns along the species’ distribution in southern Africa based on a combination of molecular and long-term tag-recapture data. Eight species-specific microsatellite markers (N = 73) and two mitochondrial genes, nicotinamide adenine dehydrogenase subunit 4 and control region (N = 45), did not reveal any significant genetic structure among neighbouring sites. Nonetheless, tagging data demonstrate a remarkable degree of site fidelity with 76% of sharks recaptured within 50 km of the original tagging location. On a larger geographic scale, dispersal is governed by oceanographic features as demonstrated by the lack of movements across the Benguela-Agulhas transition zone separating the South-East Atlantic Ocean (SEAO) and South-West Indian Ocean (SWIO) populations. Microsatellite data supported very shallow ocean-based structure (SEAO and SWIO) and historical southward gene flow following the Agulhas Current, corroborating the influence of this dynamic oceanographic system on gene flow. Moreover, no movements between Namibia and South Africa were observed, indicating that the Lüderitz upwelling formation off the Namibian coast acts as another barrier to dispersal and gene flow. Overall, these results show that dispersal and stock structure of M. mustelus are governed by a combination of behavioural traits and oceanographic features such as steep temperature gradients, currents and upwelling systems.
Authors
Therese With BergeAbstract
No abstract has been registered
Authors
Ran Nisim Lati Jesper Rasmussen Dionisio Andújar Jose Dorado Therese With Berge Christina Wellhausen Michael Pflanz Henning Nordmeyer Michael Schirrmann Hanan Eizenberg Paul Neve Rasmus Nyholm Jørgensen Svend ChristensenAbstract
The adoption of site-specific weed management (SSWM) technologies by farmers is not aligned with the scientific achievements in this field. While scientists have demonstrated significant success in real-time weed identification, phenotyping and accurate weed mapping by using various sensors and platforms, the integration by farmers of SSWM and weed phenotyping tools into weed management protocols is limited. This gap was therefore a central topic of discussion at the most recent workshop of the SSWM Working Group arranged by the European Weed Research Society (EWRS). This insight paper aims to summarise the presentations and discussions of some of the workshop panels and to highlight different aspects of weed identification and spray application that were thought to hinder SSWM adoption. It also aims to share views and thoughts regarding steps that can be taken to facilitate future implementation of SSWM.
Authors
Agnieszka Ostafińska Robert Jankowiak Piotr Bilański Halvor Solheim Michael J. WingfieldAbstract
Sporothrix (Sordariales, Ascomycota) is a well-supported monophyletic lineage within the Ophiostomatales, species of which occur in a diverse range of habitats including on forest trees, in the soil, associated with bark beetles and mites as well as on the fruiting bodies of some Basidiomycota. Several species have also been reported as important human and animal pathogens. During surveys of insect- and wound-associated Ophiostomatales from hardwood trees in Poland, many isolates with affinity to Sporothrix were recovered. In the present study, six undescribed Sporothrix spp. collected during these surveys are characterized based on their morphological characteristics and multi-locus phylogenenetic inference. They are described as Sporothrix cavum, Sporothrix cracoviensis, S. cryptarchum, S. fraxini, S. resoviensis, and S. undulata. Two of the Sporothrix spp. reside in the S. gossypina-complex, while one forms part of the S. stenoceras-complex. One Sporothrix sp. is a member of lineage F, and two other species grouped outside any of the currently defined species complexes. All the newly described species were recovered from hardwood habitats in association with sub-cortical insects, wounds or woodpecker cavities. These species were morphologically similar, with predominantly asexual states having hyaline or lightly pigmented conidia, which produce holoblastically on denticulate conidiogenous cells. Five of the new taxa produce ascomata with necks terminating in long ostiolar hyphae and allantoid ascospores without sheaths. The results suggest that Sporothrix species are common members of the Ophiostomatales in hardwood ecosystems of Poland.
Abstract
No abstract has been registered
Authors
Sunil Mundra O. Janne Kjønaas Luis Morgado Anders Kristian Krabberød Yngvild Ransedokken Håvard KauserudAbstract
Soil depth represents a strong physiochemical gradient that greatly affects soil-dwelling microorganisms. Fungal communities are typically structured by soil depth, but how other microorganisms are structured is less known. Here, we tested whether depth-dependent variation in soil chemistry affects the distribution and co-occurrence patterns of soil microbial communities. This was investigated by DNA metabarcoding in conjunction with network analyses of bacteria, fungi, as well as other micro-eukaryotes, sampled in four different soil depths in Norwegian birch forests. Strong compositional turnover in microbial assemblages with soil depth was detected for all organismal groups. Significantly greater microbial diversity and fungal biomass appeared in the nutrient-rich organic layer, with sharp decrease towards the less nutrient-rich mineral zones. The proportions of copiotrophic bacteria, Arthropoda and Apicomplexa were markedly higher in the organic layer, while patterns were opposite for oligotrophic bacteria, Cercozoa, Ascomycota and ectomycorrhizal fungi. Network analyses indicated more intensive inter-kingdom co-occurrence patterns in the upper mineral layer (0–5 cm) compared to the above organic and the lower mineral soil, signifying substantial influence of soil depth on biotic interactions. This study supports the view that different microbial groups are adapted to different forest soil strata, with varying level of interactions along the depth gradient.
Authors
Csilla FarkasAbstract
No abstract has been registered
Abstract
Most studies on the effects of tillage operations documented the effects of tillage on losses through surface runoff. On flat areas, the subsurface runoff is the dominating pathway for water, soil and nutrients. This study presents results from a five-year plot study on a flat area measuring surface and subsurface runoff losses. The treatments compared were (A) autumn ploughing with oats, (B) autumn ploughing with winter wheat and (C) spring ploughing with spring barley (n = 3). The results showed that subsurface runoff was the main source for soil (67%), total phosphorus (76%), dissolved reactive phosphorus (75%) and total nitrogen (89%) losses. Through the subsurface pathway, the lowest soil losses occurred from the spring ploughed plots. Losses of total phosphorus through subsurface runoff were also lower from spring ploughing compared to autumn ploughing. Total nitrogen losses were higher from autumn ploughing compared to other treatments. Losses of total nitrogen were more influenced by autumn ploughing than by a nitrogen surplus in production. Single extreme weather events, like the summer drought in 2018 and high precipitation in October 2014 were crucial to the annual soil and nutrient losses. Considering extreme weather events in agricultural management is a necessary prerequisite for successful mitigation of soil and nutrient losses in the future.
Authors
Therese With BergeAbstract
No abstract has been registered
Abstract
No abstract has been registered