Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2021
Authors
Yngvild Wasteson Henning Sørum Bjørn-Arne Lindstedt Arnfinn Sundsfjord Hans Geir Eiken Erik J. Joner Anders Aas Carsten Ulrich Schwermer Pawel Krzeminski Ernst Kristian Rødland Astrid Louise Wester Halfdan Olafssøn Andre Olafssøn Trond Ingebretsen Rune Holmstad Nina DueAbstract
No abstract has been registered
Abstract
No abstract has been registered
Authors
Tove Aagnes Utsi Nigel Yoccoz Claire Armstrong Victoria Gonzalez Snorre Hagen Ingibjörg Svala Jónsdóttir Nhat Minh Pham Francisco I. Pugnaire Katriona Shea David A. Wardle Sophia Zielosko Kari Anne BråthenAbstract
No abstract has been registered
Abstract
Climate change is expected to increase the frequency and intensity of extreme events in northern ecosystems. The outcome of these events across the landscape, might be mediated by species effects, such as niche construction, with likely consequences on vegetation resilience. To test this hypothesis, we simulated an extreme event by removing aboveground vegetation in tundra heathlands dominated by the allelopathic dwarf shrub Empetrum nigrum, a strong niche constructor. We tested the hypothesis under different climate regimes along a 200-km long gradient from oceanic to continental climate in Northern Norway. We studied the vegetation recovery process over ten years along the climatic gradient. The recovery of E. nigrum and subordinate species was low and flattened out after five years at all locations along the climatic gradient, causing low vegetation cover at the end of the study in extreme event plots. Natural seed recruitment was low at all sites, however, the addition of seeds from faster growing species did not promote vegetation recovery. A soil bioassay from 8 years after the vegetation was removed, suggested the allelopathic effect of E. nigrum was still present in the soil environment. Our results provide evidence of how a common niche constructor species can dramatically affect ecosystem recovery along a climatic gradient after extreme events in habitats where it is dominant. By its extremely slow regrowth and it preventing establishment of faster growing species, this study increases our knowledge on the possible outcomes when extreme events harm niche constructors in the tundra.
2020
Authors
Paul Eric Aspholm Kristin Forfang Cornelya Klutsch Ida Marie Bardalen Fløystad Vilde Rushfeldt Beddari Inger Søvik Beate Banken Bakke Tommi Nyman Snorre HagenAbstract
No abstract has been registered
Authors
Simo Maduna Adam Vivian-Smith Ólöf Dóra Bartels Jónsdóttir Albert Imsland Cornelya Klutsch Tommi Nyman Hans Geir Eiken Snorre HagenAbstract
The lumpfish Cyclopterus lumpus is commercially exploited in numerous areas of its range in the North Atlantic Ocean, and is important in salmonid aquaculture as a biological agent for controlling sea lice. Despite the economic importance, few genetic resources for downstream applications, such as linkage mapping, parentage analysis, marker-assisted selection (MAS), quantitative trait loci (QTL) analysis, and assessing adaptive genetic diversity are currently available for the species. Here, we identify both genome- and transcriptome-derived microsatellites loci from C. lumpus to facilitate such applications. Across 2,346 genomic contigs, we detected a total of 3,067 microsatellite loci, of which 723 were the most suitable ones for primer design. From 116,555 transcriptomic unigenes, we identified a total of 231,556 microsatellite loci, which may indicate a high coverage of the available STRs. Out of these, primer pairs could only be designed for 6,203 loci. Dinucleotide repeats accounted for 89 percent and 52 percent of the genome- and transcriptome-derived microsatellites, respectively. The genetic composition of the dominant repeat motif types showed differences from other investigated fish species. In the genome-derived microsatellites AC/GT (67.8 percent), followed by AG/CT (15.1 percent) and AT/AT (5.6 percent) were the major motifs. Transcriptome-derived microsatellites showed also most dominantly the AC/GT repeat motif (33 percent), followed by A/T (26.6 percent) and AG/CT (11 percent). Functional annotation of microsatellite-containing transcriptomic sequences showed that the majority of the expressed sequence tags encode proteins involved in cellular and metabolic processes, binding activity and catalytic reactions. Importantly, STRs linked to genes involved in immune system process, growth, locomotion and reproduction were discovered in the present study. The extensive genomic marker information reported here will facilitate molecular ecology studies, conservation initiatives and will benefit many aspects of the breeding programmes of C. lumpus.
Authors
Juho Vuolteenaho Hallvard Jensen Cornelya Klutsch Helena Klöckener Helena Klöckener Birk Schulze Paul Eric AspholmAbstract
No abstract has been registered
Lecture – ESS SURVEY UPDATE AND NEXT STEPS
Cornelya Klutsch, Paul Eric Aspholm, Hallvard Jensen, ...
Abstract
No abstract has been registered
Authors
Isobel Phoebus John Boulanger Hans Geir Eiken Ida Marie Bardalen Fløystad Karen Graham Snorre Hagen Anja Sorensen Gordon StenhouseAbstract
Wildlife managers conduct population inventories to monitor species, particularly those at-risk. Although costly and time consuming, grid-based DNA hair-snag sampling has been the standard protocol for grizzly bear inventories in North America, while opportunistic fecal DNA sampling is more commonly used in Europe. Our aim is to determine if low-cost, low-effort scat sampling along roads can replace the current standard. We compare two genetic non-invasive techniques using concurrent sampling within the same grid system and spatially explicit capture–recapture. We found that given our methodology and the present status of fecal genotyping for grizzly bears, scat sampling along roads cannot replace hair sampling to estimate population size in low-density areas. Hair sampling identified the majority of individual grizzly bears, with a higher success rate of individuals identified from grizzly bear samples (100%) compared to scat sampling (14%). Using scat DNA to supplement hair data did not change population estimates, but it did improve estimate precision. Scat samples had higher success identifying species (98%) compared with hair (80%). Scat sampling detected grizzly bears in grid cells where hair sampling showed non-detection, with almost twice the number of cells indicating grizzly bear presence. Based on our methods and projected expenses for future implementation, we estimated an approximate 30% cost reduction for sampling scat relative to hair. Our research explores the application of genetic non-invasive approaches to monitor bear populations. We recommend wildlife managers continue to use hair-snag sampling as the primary method for DNA inventories, while employing scat sampling as supplemental to increase estimate precision. Scat sampling may better indicate presence of bear species through greater numbers and spatial distribution of detections, if sampling is systematic across the entire area of interest. Our findings speak to the management of other species and regions, and contribute to ongoing advances of monitoring wildlife populations.
Authors
Benedicte Lissner Beddari Sergey Ogurtsov Sari Magga Jaru Kangasniemi Ida Marie Bardalen Fløystad Inger Søvik Tom Sotkajærvi Rolf Randa Leif E. Ollila Vetle Lindgren Beate Banken Bakke Vilde Rushfeldt Beddari Natalia Polikarpova Tuomo Ollila Snorre Hagen Hans Geir EikenAbstract
Siden 2005 har populasjonen av grenseoverskridene brunbjørn (Ursus arctos) i Trilateral Park Pasvik-Inari-Pechenga (Norge-Finland-Russland) blitt overvåket ved å bruke genetiske analyser av hår og ekskrement-prøver samlet inn opportunistisk i felt. En mer systematiske metode med hårfeller hvert fjerde år ble i 2007 startet opp for å samle inn bjørnehår til genetisk analyse. Metoden består i å sette ut 56 hårfeller med luktstoff i Norge, Finland og Russland i et 5 x 5 km2 rutenett (totalt ca. 1400 km2). Dette prosjektet ble gjentatt i 2011, 2015 og nå i sesongen 2019 med 58 ruter og ved bruk av samme metode som i 2007. I 2019 sesongen ble det samlet inn 182 prøver, der 66 av disse var fra Finland, 59 fra Norge og 57 fra Russland. For 144 (79,1 %) av de 182 hårprøvene var det positivt resultat i den bjørne-spesifikke analysen, og en komplett DNA profil kunne bestemmes for 136 av de positive prøvene. Det ble totalt påvist 47 forskjellige bjørner (25 hunner og 22 hanner). Av disse 47 individene var 24 påvist i tidligere år, mens 23 var til nå ukjente bjørner. Totalt ble det påvist 20 bjørner i Finland, 14 bjørner i Norge og 16 bjørner i Russland...