Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2013
Authors
Tore SkrøppaAbstract
No abstract has been registered
Authors
Tore SkrøppaAbstract
No abstract has been registered
Abstract
No abstract has been registered
Abstract
Fruit-set involves a series of physiological and morphological changes that are well described for tomato and Arabidopsis, but largely unknown for sweet pepper (Capsicum annuum). The aim of this paper is to investigate whether mechanisms of fruit-set observed in Arabidopsis and tomato are also applicable to C. annuum. To do this, we accurately timed the physiological and morphological changes in a post-pollinated and un-pollinated ovary. A vascular connection between ovule and replum was observed in fertilized ovaries that undergo fruit development, and this connection was absent in unfertilized ovaries that abort. This indicates that vascular connection between ovule and replum is an early indicator for successful fruit development after pollination and fertilization. Evaluation of histological changes in the carpel of a fertilized and unfertilized ovary indicated that increase in cell number and cell diameter both contribute to early fruit growth. Cell division contributes more during early fruit growth while cell expansion contributes more at later stages of fruit growth in C. annuum. The simultaneous occurrence of a peak in auxin concentration and a strong increase in cell diameter in the carpel of seeded fruits suggest that indole-3-acetic acid stimulates a major increase in cell diameter at later stages of fruit growth. The series of physiological and morphological events observed during fruit-set in C. annuum are similar to what has been reported for tomato and Arabidopsis. This indicates that tomato and Arabidopsis are suitable model plants to understand details of fruit-set mechanisms in C. annuum.
Abstract
No abstract has been registered
Authors
Franҫois Lefèvre Jarkko Koskela Jason Hubert Hojka Kraigher Roman Longauer Ditte C. Olrik Silvio Schüler Michele Bozzano Paraskevi Alizoti Remigijus Bakys Cathleen Baldwin Dalibor Ballian Sanna Black-Samuelsson Dagmar Bednarova Sándor Bordács Eric Collin Bart De Cuyper Sven M.G. De Vries Thröstur Eysteinsson Josef Frýdl Michaela Haverkamp Mladen Ivankovic Heino Konrad Czeslaw Koziol Tiit Maaten Eduardo Notivol Paino Hikmet Öztürk Ivanova Denitsa Pandeva Gheorghe Parnuta Andrej Pilipovic Dragos Postolache Cathal Ryan Arne Steffenrem Maria Carolina Varela Federico Vessella Roman T. Volosyanchuk Marjana Westergren Frank Wolter Leena Yrjänä Inga ZarinaAbstract
Dynamic conservation of forest genetic resources (FGR) means maintaining the genetic diversity of trees within an evolutionary process and allowing generation turnover in the forest. We assessed the network of forests areas managed for the dynamic conservation of FGR (conservation units) across Europe (33 countries). On the basis of information available in the European Information System on FGR (EUFGIS Portal), species distribution maps, and environmental stratification of the continent, we developed ecogeographic indicators, a marginality index, and demographic indicators to assess and monitor forest conservation efforts. The pan-European network has 1967 conservation units, 2737 populations of target trees, and 86 species of target trees. We detected a poor coincidence between FGR conservation and other biodiversity conservation objectives within this network. We identified 2 complementary strategies: a species-oriented strategy in which national conservation networks are specifically designed for key target species and a site-oriented strategy in which multiple-target units include so-called secondary species conserved within a few sites. The network is highly unbalanced in terms of species representation, and 7 key target species are conserved in 60% of the conservation units. We performed specific gap analyses for 11 tree species, including assessment of ecogeographic, demographic, and genetic criteria. For each species, we identified gaps, particularly in the marginal parts of their distribution range, and found multiple redundant conservation units in other areas. The Mediterranean forests and to a lesser extent the boreal forests are underrepresented. Monitoring the conservation efficiency of each unit remains challenging; however, <2% of the conserved populations seem to be at risk of extinction. On the basis of our results, we recommend combining species-oriented and site-oriented strategies.
2012
Authors
Merete Grung Sissel Ranneklev Øyvind Garmo Richard Frederic Wright Tor Myking Einar Heegaard Bernt-Håvard Øyen Fride Høistad Schei Hans Haavardsholm BlomAbstract
CO2 Technology Centre Mongstad will be the world\"s largest test centre for testing and development of CO2 capture technology. The emissions to the atmosphere from CO2 Technology Centre Mongstad contain amines and may in addition contain or lead to the formation of degradation products from amine-based CO2 capture technology. An environmental baseline survey was conducted in 2011 prior to the operation. The survey performed is broad, and describes in detail the environmental situation both in terrestrial and aquatic ecosystems as well as relevant chemical compositions of a range of matrices such as soil, plants and water. The data collected in the monitoring program were used to propose a future monitoring program in the area.
Authors
Igor A. Yakovlev YeonKyeong Lee Adam Vivian-Smith Jorunn Elisabeth Olsen Carl Gunnar FossdalAbstract
In Norway spruce there is an enigmatic epigenetic memory of the temperature conditions during embryogenesis affecting vital phenological traits (Yakovlev et al. 2012). Adaptive phenological traits such as bud burst and bud set, observed as clinal variation in nature, are the ones affected.The epigenetic memory is establishment exclusively during embryogenesis in response to environmental impact. The epitype fixated by the time the embryo is fully developed without any change in the primary DNA sequence and is mitotically propogated. The epigenetic mechanism influence the phenotype through altered regulation of gene expression and is propagated throughout every growth cycle for the entire lifespan of this long lived species.The epigenetic memory may be realized through several molecular mechanisms including DNA methylation, and histone modifications affecting chromatin, as well as by small non-coding RNAs, and may also be related to the mechanisms silencing transposable or repetitive elements in the genome. MicroRNAs (miRNAs), endogenous small regulatory RNAs, are shown to be differentially expressed in genetically identically but epigenetically different progenies, in regards to the timing of bud burst and bud set (Yakovlev et al. 2010).We have started large scale studies using next regeneration sequencing approaches to identify and characterize the genes and regulatory elements involved in the initiation, maintenance, and heritability of the epigenetic memory. Epigenetic related changes in miRNA regulation during the establishment of the epigenetic memory are now studied in in vitro derived somatic embryos developing under cold (18C) and warm (30C) environmental conditions (that induce epitypes).We have constructed and sequenced 10 small RNA libraries during proliferation, maturation stage 1, 2 3 and the mature stage of embryo formation in the contrasted temperatures, in two control libraries during proliferation at 22C, as well as their mRNA transcriptomes using the Ion Torrent PGMTM (Life technologies) platform.We are expecting to determine at what stage(s) during embryogenesis the epigenetic memory marks are being laid down by identifying when the transcriptomic differences, of small RNA and mRNAs, between the epitypes are the most prominent during embryogenesis. The identification of novel miRNA candidates and the confirmation of conserved and novel miRNAs will be presented.
Authors
Tore SkrøppaAbstract
No abstract has been registered
Authors
Tore SkrøppaAbstract
No abstract has been registered