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NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.

2024

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Abstract

Here, we present, for the first time, the Ion TorrentⓇ next-generation sequencing (NGS) data for five houndsharks (Chondrichthyes: Triakidae), which include Galeorhinus galeus (number of bases pairs (bp) 17,487; GenBank accession number ON652874), Mustelus asterias (16,708; ON652873), Mustelus mosis (16,755; ON075077), Mustelus palumbes (16,708; ON075076), and Triakis megalopterus (16,746; ON075075). All assembled mitogenomes encode 13 protein-coding genes (PCGs), two ribosomal (r)RNA genes, and 22 transfer (t)RNA genes (tRNALeu and tRNASer are duplicated), except for G. galeus which contains 23 tRNA genes where tRNAThr is duplicated. The data presented in this paper can assist other researchers in further elucidating the diversification of triakid species and the phylogenetic relationships within Carcharhiniformes (groundsharks) as mitogenomes accumulate in public repositories.

Abstract

To increase soil organic carbon (SOC) storage, we need to improve our understanding on how to make best use of available plant biomass. Is it better to leave harvest residues on the field, or can we achieve higher SOC storage after processing biomass through, for instance, composting or pyrolysis to produce biochar? In the present study, we developed new parameters for different types of exogenous organic materials (EOMs), which allowed us to estimate the long-term effect of EOM addition on SOC storage using the soil carbon model RothC. For this purpose, we used a model version that included two additional EOM pools. First, we simulated the SOC evolution after addition of equal amounts of C in plant material and different EOMs (manure, compost, digestate, biochar) for a 38-year cropland trial in Switzerland. As expected, biochar showed the greatest increase in SOC due to its high stability. Next, we estimated how much C would remain after subjecting equivalent amounts of plant material and other EOMs to different processes. Loss rates of C for different processes were obtained from the literature. Due to different decomposition rates, the amounts of C remaining in the EOMs ranged from 7 % for anaerobic digestion of animal excreta to 100 % for plant material added directly to soil. These amounts of C were then added to the soil in the model experiments. Although the largest amount of C is lost during processing to biochar, biochar would clearly lead to highest long-term SOC stocks. Based on these first results we conclude that the trade-off between off-site stabilization and in-soil mineralization does not compromise the use of biochar for soil C storage. This means that despite the high C losses of about 50 % during biochar production, higher amounts of C remain in the soil because biochar has very low decomposition rates. In terms of C sequestration efficiency, biochar thus clearly outperforms the other biomass processing pathways. However, for practical recommendations, additional factors should be considered, such as nutrient availability of EOMs and environmental effects during processing, storage and soil application like nutrient leaching or gaseous emissions. Furthermore, we suggest a full life cycle assessment that considers e.g. energy costs for transport of biomass and energy savings from fossil fuel substitution by natural gas.